interface graph thumbnail
legend  pdf

structure nameSGRAI BOUND TO SECONDARY SITE DNA AND MG(II)
(SgraIR restriction enzyme)
referenceHorton et al. 'Acta 67 67 2011
sourceStreptomyces griseus
experimentX-ray (resolution=2.95, R-factor=0.194)
structural superfamilyRestriction endonuclease-like;
sequence familyCfr10I/Bse634I restriction endonuclease;
multimeric complexes3dpg_AB 3dvo_AB 3dvo_CD 3dw9_AB 3mq6_AB 3mq6_CD 3mq6_EF 3mq6_GH 3mqy_AB 3n78_AB 3n7b_AB 6obj_AB 7ss5_AB
reference complex6obj_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRQNKRSRSDR

Estimated binding specificities ?

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# IC=6.711 IC/col=0.959 n_of_columns=7 specificity:   
A |   0   9   9   0   0   0   9
C |  96  67  69  96   0   0   9
G |   0   9   9   0  96  96   9
T |   0  11   9   0   0   0  69
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updated Mon Dec 18 08:34:22 2023