3rei_ABCDEFGH
citing 3d-footprint
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structure name
2.65 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 145 BP ALPHA-SATELLITE DNA (NCP145) DERIVATIZED WITH TRIAMMINECHLOROPLATINUM(II) CHLORIDE
reference
Davey et al. 'Nucleic 39 8200 2011
source
XENOPUS LAEVIS
experiment
X-ray (resolution=2.65, R-factor=?)
structural superfamily
Histone-fold;P-loop containing nucleoside triphosphate hydrolases;Chromo domain-like;Homeodomain-like;lambda repressor-like DNA-binding domains;p53-like transcription factors;
reference complex
5o9g_E
5o9g_F
5o9g_G
5x0y_D
5z3u_A
6a5l_e
6ftx_B
6g0l_M
6ir9_e
6iro_A
6nqa_A
6pww_K
6r25_E
6r8y_H
6yov_C
7at8_D
7eg6_A
7egp_S
7nkx_a
7nkx_f
7nky_e
7otq_E
7u0g_M
7unc_a
7und_e
7vdt_B
7xcr_F
7xsx_a
7xzx_N
7xzz_N
7zs9_e
8aag_A
8atf_Q
8bvw_e
8byq_e
8ceo_r
8cww_A
8g57_E
8he5_a
8siy_G
8t9f_F
links to other resources
NAKB
PDIdb
DNAproDB
protein sequence
> 3rei_A interface=3,28,46, phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger > 3rei_B interface=25, vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 3rei_C interface= aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk > 3rei_D interface= ktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak > 3rei_E interface=3,4,28, phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger > 3rei_F interface=30, krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 3rei_G interface=29, aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk > 3rei_H interface=3, ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak
3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.
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updated Fri Dec 15 16:32:57 2023