5o9g_G : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	STRUCTURE OF NUCLEOSOME-CHD1 COMPLEX
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	1aoi_ABCDEFGH 1kx3_ABCDEFGH 1kx4_ABCDEFGH 1kx5_ABCDEFGH 1m18_ABCDEFGH 1m19_ABCDEFGH 1m1a_ABCDEFGH 1p34_ABCDEFGH 1p3a_ABCDEFGH 1p3b_ABCDEFGH 1p3f_ABCDEFGH 1p3g_ABCDEFGH 1p3i_ABCDEFGH 1p3k_ABCDEFGH 1p3l_ABCDEFGH 1p3m_ABCDEFGH 1p3o_ABCDEFGH 1p3p_ABCDEFGH 1s32_ABCDEFGH 1zbb_ABCDEFGHabcdefgh 1zla_ABCDEFGH 2fj7_ABCDEFGH 2nzd_ABCDEFGH 3b6f_ABCDEFGH 3b6g_ABCDEFGH 3c1b_ABCDEFGH 3c1c_ABCDEFGH 3kuy_ABCDEFGH 3kwq_ABCDEFGH 3kxb_ABCDEFGH 3lel_ABCDEF 3lel_GH 3lel_KLMOPQR 3lja_ABCDEFGH 3lz0_ABCDEFGH 3lz1_ABCDEFGH 3mgp_ABCDEFGH 3mgq_ABCDEFGH 3mgr_ABCDEFGH 3mgs_ABCDEFGH 3mnn_ABCDEFGH 3mvd_ABCDEFGHKL 3o62_ABCDEFGH 3reh_ABCDEFGH 3rei_ABCDEFGH 3rej_ABCDEFGH 3rek_ABCDEFGH 3rel_ABCDEFGH 3tu4_ABCDEFGHKL 3ut9_ABCDEFGH 3uta_ABCDEFGH 3utb_ABCDEFGH 4j8u_ABCDEFGH 4j8v_ABCDEFGH 4j8w_ABCDEFGH 4j8x_ABCDEFGH 4kgc_ABCDEFGH 4ld9_ABCDEFGH 4r8p_ABCDEFGHL 4wu8_ABCDEFGH 4wu9_ABCDEFGH 4xuj_ABCDEFGH 4xzq_ABCDEFGH 4ys3_ABCDEFGH 4z66_ABCDEFGH 5cp6_ABCDEFGH 5dnm_ABCDEFGH 5dnn_ABCDEFGH 5e5a_ABCDEFGH 5f99_ABCDEFGH 5hq2_ABGH 5mlu_ABCDEFGH 5nl0_ABCDEFGHZ 5nl0_KLMN 5o9g_ABCDEFGHW 5omx_ABCDEFGH 5ong_ABCDEFGH 5onw_ABCDEFGH 5oxv_ABCDEFGHKLMNOPQR 5oy7_ABCDEFGHIJKLMNOPQRSTUVWXYZabcdef 5x0x_ABCDEFGHO 5x0y_ABCDEFGHO 5xf6_ABCDEFGH 5z3l_ABCDEFGHO 5z3o_ABCDEFGHO 5z3u_ABCDEFGHO 5z3v_ABCDEFGHO 6esf_ABCDEFGH 6esg_ABCDEFGH 6esh_ABCDEFGH 6esi_ABCDEFGH 6fq5_ABCDEFGH 6fq6_ABCDEFGH 6fq8_ABCDEFGH 6ftx_ABCDEFGHW 6g0l_ABCDEFGHMW 6iro_ABCDEFGHL 6iy2_ABCDEFGHO 6iy3_ABCDEFGHO 6j99_ABCDEFGH 6jm9_ABCDEFGH 6jma_ABCDEFGH 6jyl_ABCDEFGHK 6k1p_ABCDEFGHK 6kvd_ABCDEFGH 6muo_ABCDEFGHM 6mup_ABCDEFGHMN 6ne3_ABCDEFGHW 6nj9_ABCDEFGH 6nn6_ABCDEFGH 6nog_ABCDEFGH 6nqa_ABCDEFGH 6o96_ABCDEFGH 6om3_ABCDEFGH 6om3_LMNOPQRST 6pa7_ABCDEFGHKP 6pww_AGHIJKLMN 6pwx_AGHIJKLMN 6r1t_ABCDEFGH 6r1u_ABCDEFGHK 6r25_ABCDEFGHM 6ryr_ABCDEFGHW 6ryu_ABCDEFGHVW 6s01_ABCDEFGHK 6tem_ABCDEFGH 6vyp_ABCDEFGHKLMN 6vyp_abcdefghklmn 6wkr_CEIJKMOQRS 6wz5_ABCDEFGH 6wz9_ABCDEFGH 6x0n_ABCDEFGHO 6x0n_PR 6x0n_abcdefgh 6z6p_ABCDEFGHM 6z6p_KN 6zhx_ABCDEFGH 7at8_ADEFGHIJK 7cro_BCDEFGHM 7crp_BCDEFGHM 7crq_BCDEFGHLM 7crr_BCDEFGHM 7e8i_ABCDEFGH 7ea5_ABCDEFGH 7eg6_ABCDEFGH 7egp_AOPQRSTUV 7enn_ACDEFGHKL 7k6p_ABCDEFGH 7k6q_ABCDEFGHK 7ktq_ABCDEFGH 7nkx_ABEWabcdef 7nky_ABEOQabcdef 7nky_Zh 7oh9_ABCDEFGHKL 7oha_ABCDEFGHKL 7ohb_ABCDEFGHK 7ohc_ABCDEFGH 7otq_ABCDEFGHK 7swy_ABCDEFGH 7tn2_ABCDEFGHW 7unc_ABabcdefgh 7und_ABEZabdefgh 7vdt_ABCDEFGHK 7x3v_ABCDEFGH 7x3x_ABCDEFGH 7xfc_ABCDEFGH 7xfi_ABCDEFGH 7xfl_ABCDEFGH 7xfn_ABCDEFGH 7xnp_ABCDEFGH 7xpx_ABCDEFGH 7zs9_257AMOQRUWXabcdefgh 7zsa_7ABMOQRUWXabcdefgh 7zsb_7ABMOQRUWXabcdefgh 8cze_ABCDEFGH 8du4_ABCDEFGH 8etv_ABCDEF 8eue_ABCDEFHK 8g6g_ABCDEFGH 8g6h_ABCDEFGH 8g6q_ABCDEFGH 8g86_ABCDEFGH 8siy_CDEFGHIJ 8t3t_ABCDEFGH 8t3w_ABCDEFGH 8t3y_ABCDEFGH 8t9h_ABCDEFGH 8u5h_IJKMOQRS
redundant complexes	1kx3_C 1kx4_G 1m19_G 1p34_G 1p3a_G 1p3g_C 1p3i_G 1p3k_G 1p3m_G 1zbb_G 1zla_C 3c1c_G 3lel_M 3mgp_G 3reh_C 3rej_G 3rek_C 3uta_C 3utb_G 4wu8_C 4z66_C 5f99_C 5omx_G 5ong_G 5oxv_G 5oy7_C 5xf6_G 6esf_G 6esg_G 6ftx_C 6jm9_G 6jma_G 6mup_C 6pwx_M 6r1t_G 6ryr_G 6wz5_G 6zhx_C 7crp_C 7ea5_C 7enn_C 7k6p_G 7oha_G 7ohb_G 7xfi_C 7xfm_C 7xpx_G 8b0a_C 8byq_g 8eue_C 8f86_G 8g8b_C 8g8g_C 8hxz_C 8ihm_G 8u5h_K 8v7l_C 1aoi 1kx5 1m18 1m1a 1p3b 1p3f 1p3l 1p3o 1p3p 1s32 2fj7 2nzd 3b6f 3b6g 3c1b 3kuy 3kwq 3kxb 3lja 3lz0 3lz1 3mgq 3mgr 3mgs 3mnn 3mvd 3o62 3rei 3rel 3tu4 3ut9 4j8u 4j8v 4j8w 4j8x 4kgc 4ld9 4r8p 4wu9 4xuj 4xzq 4ys3 5cp6 5dnm 5dnn 5e5a 5hq2 5mlu 5nl0 5onw 5x0x 5x0y 5z3l 5z3o 5z3u 5z3v 6esh 6esi 6fq5 6fq6 6fq8 6g0l 6iro 6iy2 6iy3 6j99 6jyl 6k1p 6kvd 6muo 6ne3 6nj9 6nn6 6nog 6nqa 6o96 6om3 6pa7 6pww 6r1u 6r25 6ryu 6s01 6tem 6vyp 6wkr 6wz9 6x0n 6z6p 7at8 7cro 7crq 7crr 7e8i 7eg6 7egp 7k6q 7ktq 7nkx 7nky 7oh9 7ohc 7otq 7swy 7tn2 7unc 7und 7vdt 7x3t 7x3v 7x3w 7x3x 7xfc 7xfh 7xfj 7xfl 7xfn 7xnp 7yi1 7zs9 7zsa 7zsb 8aag 8bvw 8bz1 8cbn 8cbq 8ceo 8cww 8cze 8du4 8etv 8g6g 8g6h 8g6q 8g6s 8g86 8g88 8gpn 8of4 8pc5 8pc6 8peo 8pep 8siy 8svf 8t3t 8t3w 8t3y 8t9h 8tof 8v4y 8v6v
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5o9g_G interface=22, aktrssraglqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk

  
  ------RG--         +-----------------------------8upf_G    
                   +-9 
  ------RC--       ! +-----------------------------7yqk_C    
                   !  
  ------RARA       !                              +6a5l_g    
                   !                            +-1 
  ------RG--       !          +-----------------3 +8txv_G    
                   !          !                 ! 
  --HGRTRG--     -10        +-6                 +8rbx_V    
                   !        ! ! 
  ------RT--       !        ! !      +-----------8u14_G    
                   !    +---7 +------5 
  ------RC--       !    !   !        +-----------7ux9_E    
                   !    !   ! 
  ------RGRG       !    !   !             +------8kcb_A    
                   +----8   +-------------4 
  ------RA--            !                 +------7e9c_F    
                        ! 
  LC--------            !                        +8bvw_e    
                        +------------------------2 
  ------RT--                                     +6px1_A

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updated Sat Jan 10 08:38:21 2026