Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF SNF2-NUCLEOSOME COMPLEX IN ADP STATE
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes1aoi_ABCDEFGH 1kx3_ABCDEFGH 1kx4_ABCDEFGH 1kx5_ABCDEFGH 1m18_ABCDEFGH 1m19_ABCDEFGH 1m1a_ABCDEFGH 1p3b_ABCDEFGH 1p3f_ABCDEFGH 1p3g_ABCDEFGH 1p3i_ABCDEFGH 1p3o_ABCDEFGH 1p3p_ABCDEFGH 1s32_ABCDEFGH 1zbb_ABCDEFGHabcdefgh 2fj7_ABCDEFGH 2nzd_ABCDEFGH 3b6f_ABCDEFGH 3b6g_ABCDEFGH 3c1b_ABCDEFGH 3kuy_ABCDEFGH 3kwq_ABCDEFGH 3kxb_ABCDEFGH 3lja_ABCDEFGH 3lz0_ABCDEFGH 3lz1_ABCDEFGH 3mgp_ABCDEFGH 3mgq_ABCDEFGH 3mgr_ABCDEFGH 3mgs_ABCDEFGH 3mnn_ABCDEFGH 3mvd_ABCDEFGHKL 3o62_ABCDEFGH 3reh_ABCDEFGH 3rei_ABCDEFGH 3rej_ABCDEFGH 3rek_ABCDEFGH 3rel_ABCDEFGH 3tu4_ABCDEFGHKL 3ut9_ABCDEFGH 3uta_ABCDEFGH 3utb_ABCDEFGH 4j8u_ABCDEFGH 4j8v_ABCDEFGH 4j8w_ABCDEFGH 4j8x_ABCDEFGH 4r8p_ABCDEFGHL 4wu8_ABCDEFGH 4wu9_ABCDEFGH 4xuj_ABCDEFGH 4xzq_ABCDEFGH 4ys3_ABCDEFGH 4z66_ABCDEFGH 5cp6_ABCDEFGH 5dnm_ABCDEFGH 5dnn_ABCDEFGH 5hq2_ABGH 5mlu_ABCDEFGH 5nl0_ABCDEFGHZ 5nl0_KLMN 5oxv_ABCDEFGHKLMNOPQR 5oy7_ABCDEFGHIJKLMNOPQRSTUVWXYZabcdef 5wcu_ABCDEFGHU 5wcu_KLMNOPQRV 5xf6_ABCDEFGH 5z3l_ABCDEFGHO 5z3o_ABCDEFGHO 5z3u_ABCDEFGHO 5z3v_ABCDEFGHO 6esf_ABCDEFGH 6esg_ABCDEFGH 6esh_ABCDEFGH 6esi_ABCDEFGH 6fq5_ABCDEFGH 6fq6_ABCDEFGH 6fq8_ABCDEFGH 6ftx_ABCDEFGHW 6iro_ABCDEFGHL 6iy2_ABCDEFGHO 6iy3_ABCDEFGHO 6jm9_ABCDEFGH 6jma_ABCDEFGH 6jyl_ABCDEFGHK 6k1p_ABCDEFGHK 6nn6_ABCDEFGH 6nog_ABCDEFGH 6o96_ABCDEFGH 6om3_ABCDEFGH 6om3_LMNOPQRST 6pa7_ABCDEFGHKP 6r1t_ABCDEFGH 6r1u_ABCDEFGHK 6r25_ABCDEFGHM 6vyp_ABCDEFGHKLMN 6vyp_abcdefghklmn 6wz5_ABCDEFGH 6wz9_ABCDEFGH 6x0n_ABCDEFGHO 6x0n_PR 6x0n_abcdefgh 6y5d_ABCDEFGH 6y5d_KMNOPQRST 6zhx_ABCDEFGH 6zhy_ABCDEF 7at8_ADEFGHIJK 7e8i_ABCDEFGH 7ea5_ABCDEFGH 7k6p_ABCDEFGH 7k6q_ABCDEFGHK 7ktq_ABCDEFGH 7oh9_ABCDEFGHKL 7oha_ABCDEFGHKL 7ohb_ABCDEFGHK 7ohc_ABCDEFGH 7otq_ABCDEFGHK 7xcr_ABCDEFGH 7xct_ABCDEFGHL 7xd0_ABCDEFGHKL 7xpx_ABCDEFGH 8cze_ABCDEFGH 8ett_ABCDEF 8etv_ABCDEF 8eu2_KLMNOP 8eue_ABCDEFHK 8euj_HMOabfhk 8g57_ABCDEFGH 8g6g_ABCDEFGH 8g6h_ABCDEFGH 8g86_ABCDEFGH 8hr1_ABCDEFGH 8siy_CDEFGHIJ 8t3t_ABCDEFGH 8t3w_ABCDEFGH 8t3y_ABCDEFGH 8t9f_ABCDEFGH 8t9h_ABCDEFGH 8thu_ABCDEFGH 8u5h_IJKMOQRS 8x7k_ABCDEFGH
redundant complexes1aoi_A 1m1a_E 1p3o_A 3c1b_A 3kxb_E 3lja_E 3lz1_A 3mgq_E 3mgs_A 3rel_A 4j8u_A 4j8v_A 4wu9_A 5z3v_E 6jyl_E 6nog_A 6om3_A 6r1u_E 7e8i_A 7k6q_A 7ohc_A 7yrd_A 8thu_A 1kx3 1kx4 1kx5 1m18 1m19 1p3b 1p3f 1p3g 1p3i 1p3p 1s32 1zbb 2fj7 2nzd 3b6f 3b6g 3kuy 3kwq 3lz0 3mgp 3mgr 3mnn 3mvd 3o62 3reh 3rei 3rej 3rek 3tu4 3ut9 3uta 3utb 4j8w 4j8x 4r8p 4wu8 4xuj 4xzq 4ys3 4z66 5cp6 5dnm 5dnn 5hq2 5mlu 5nl0 5oxv 5oy7 5wcu 5xf6 5z3l 5z3u 6esf 6esg 6esh 6esi 6fq5 6fq6 6fq8 6ftx 6iro 6iy2 6iy3 6jm9 6jma 6k1p 6nn6 6o96 6pa7 6r1t 6r25 6vyp 6wz5 6wz9 6x0n 6y5d 6zhx 6zhy 7at8 7ea5 7k6p 7ktq 7oh9 7oha 7ohb 7otq 7ssa 7xcr 7xct 7xd0 7xpx 7yi1 7yi4 7yi5 7yrg 8b0a 8cww 8cze 8ett 8etv 8eu2 8eue 8euj 8g57 8g6g 8g6h 8g86 8g88 8g8b 8g8g 8hr1 8siy 8t3t 8t3w 8t3y 8t9f 8t9h 8u5h 8x7k
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  --LC----                     +---------8bvw_e    
                   +-----------2 
  RAAANA--         !           +---------1jfi_B    
                 +-4 
  ------RA       ! !           +---------7ea8_A    
                 ! +-----------3 
  ------RT     --5             +---------5gt0_C    
                 ! 
  ------RA       !                       +7xsx_a    
                 +-----------------------1 
  ------RA                               +8rbx_M    
               

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updated Mon Jun 29 21:52:11 2026