interface graph thumbnail
legend  pdf

structure nameDNA BINDING BY GATA TRANSCRIPTION FACTOR-COMPLEX 1
(Trans-acting T-cell-specific transcription factor GATA-3)
referenceBates et al. 'Cell 2 1197 2012
sourceHomo sapiens
experimentX-ray (resolution=2.80, R-factor=0.247)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyGATA zinc finger;
reference complex4hc9_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signaturePLRNLTLRNLKLRR

Estimated binding specificities ?

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# IC=7.701 IC/col=0.770 n_of_columns=10 specificity:   
A |  19  56   4   6   3   0  78   0  88  74
C |  38  13   4  78   3   0   6   0   4   7
G |  20  13   4   6   3  96   6   0   2   8
T |  19  14  84   6  87   0   6  96   2   7
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updated Thu Sep 12 19:25:54 2024