interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 22BP DNA
referenceDavlieva et al. 'Nucleic 43 4758 2015
experimentX-ray (resolution=2.30, R-factor=0.214)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
sequence familyBacterial regulatory proteins, luxR fami; Sigma70, region 4;
multimeric complexes4wu4_AB 4wul_AB
reference complex4wuh_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKKS

Estimated binding specificities ?

contactlogo
# IC=4.046 IC/col=0.809 n_of_columns=5 specificity:   
A |  67   0   9   9   0
C |   9   0   9  69  96
G |   9  96   9   9   0
T |  11   0  69   9   0
scan!

home
updated Thu Sep 12 20:09:05 2024