interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 22BP DNA
referenceDavlieva et al. 'Nucleic 43 4758 2015
experimentX-ray (resolution=2.30, R-factor=0.214)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
sequence familyBacterial regulatory proteins, luxR fami; Sigma70, region 4;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKKS

Estimated binding specificities ?

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# IC=4.007 IC/col=0.801 n_of_columns=5 specificity:   
A |   0   9  67   0  11
C |   0   9  11  96   9
G |  96  69   9   0   9
T |   0   9   9   0  67
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updated Tue Dec 17 00:22:06 2024