interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 26BP DNA
referenceDavlieva et al. 'Nucleic 43 4758 2015
experimentX-ray (resolution=2.40, R-factor=0.224)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
sequence familyBacterial regulatory proteins, luxR family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTKTHSN

Estimated binding specificities ?

readout + contactlogo
# IC=5.051 IC/col=0.722 n_of_columns=7 specificity:   
A |   0   0  75   7  24  75   7
C |   0  96   7   7  24   7   7
G |   0   0   7   7  24   7  73
T |  96   0   7  75  24   7   9
scan!

home
updated Tue Dec 17 00:24:30 2024