interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 26BP DNA
referenceDavlieva et al. 'Nucleic 43 4758 2015
experimentX-ray (resolution=2.40, R-factor=0.224)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
sequence familyBacterial regulatory proteins, luxR family;
multimeric complexes4wu4_AB 4wul_AB
reference complex4wuh_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTKTHSN

Estimated binding specificities ?

readout + contactlogo
# IC=4.960 IC/col=0.709 n_of_columns=7 specificity:   
A |   7   9  24  75   7   0  96
C |  73   7  24   7   7   0   0
G |   7   7  24   7   9  96   0
T |   9  73  24   7  73   0   0
scan!

home
updated Fri Jan 9 01:47:14 2026