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structure nameX-RAY STRUCTURE OF AAV-2 OBD BOUND TO AAVS1 SITE 3:1
(Protein Rep68)
referenceZarate-Perez et al. J.Biol.Chem. 290 27487 2015
sourceAdeno-associated virus 2 (isolate Srivastava/1982) / Adeno-associated virus 2 (isolate Srivastava/1982)
experimentX-ray (resolution=2.60, R-factor=0.206)
structural superfamilyOrigin of replication-binding domain, RBD-like;
sequence familyRep protein catalytic domain like;
multimeric complexes4zq9_ABC 5byg_AB 5byg_CD 7jse_AI 7jse_BJ 7jse_CK 7jse_DL 7jse_EM 7jse_FN 7jse_GO 7jse_HP 7jsg_BCDEFG 7jsh_ABG
reference complex7jse_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureMRRA

Estimated binding specificities ?

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# IC=3.814 IC/col=0.477 n_of_columns=8 specificity:   
A |   9  67  57  24  24  24   0   0
C |   9  11  11  24  24  24   0  96
G |  67   9  19  24  24  24  96   0
T |  11   9   9  24  24  24   0   0
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updated Fri Jan 9 02:11:24 2026