5a72_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM CA (DNA ENDONUCLEASE I-CVUI)
reference	LopezMendez et al. J.Biol.Chem. 290 28727 2015
source	CHLORELLA VULGARIS
experiment	X-ray (resolution=2.60, R-factor=0.169)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	5a72_AB 5a78_AB
reference complex	5a78_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5a72_B interface=20,24,26,28,30,31,38,44,66,68,69,70,72,74,138, nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylnlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs
interface signature	CQVRDYRFRRNDMEK

Estimated binding specificities ?

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# IC=12.863 IC/col=1.072 n_of_columns=12

specificity:

A |   0  96   0  16  96   0   0   0   0   8   8  64
C |  96   0   0   8   0  96   0   0  96   0   8   8
G |   0   0  96   0   0   0  96  16   0  88   8  16
T |   0   0   0  72   0   0   0  80   0   0  72   8

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updated Sat Aug 2 07:47:13 2025