interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HINMLR, A MERR FAMILY REGULATOR LACKING THE SENSOR DOMAIN, BOUND TO PALYNDROMIC PROMOTER DNA
(Uncharacterized HTH-type transcriptional regulator HI_0186)
referenceCounago et al. 'Nucleic 44 6981 2016
sourceHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
experimentX-ray (resolution=2.30, R-factor=0.220)
structural superfamilyPutative DNA-binding domain;
sequence familyMerR family regulatory protein;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYRFK

Estimated binding specificities ?

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# IC=4.748 IC/col=0.791 n_of_columns=6 specificity:   
A |   7  19  67   0  81   0
C |   4  14   4   0   4   0
G |   9  15   4  96   4  96
T |  76  48  21   0   7   0
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updated Tue Dec 17 01:31:21 2024