interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HINMLR, A MERR FAMILY REGULATOR LACKING THE SENSOR DOMAIN, BOUND TO PALYNDROMIC PROMOTER DNA
(Uncharacterized HTH-type transcriptional regulator HI_0186)
referenceCounago et al. 'Nucleic 44 6981 2016
sourceHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
experimentX-ray (resolution=2.30, R-factor=0.220)
structural superfamilyPutative DNA-binding domain;
sequence familyMerR family regulatory protein;
multimeric complexes5d8c_AB 5e01_AB
reference complex5d8c_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYRFK

Estimated binding specificities ?

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# IC=4.007 IC/col=0.668 n_of_columns=6 specificity:   
A |   0   9   0   9  24  69
C |  96  11  96   9  24   9
G |   0   9   0  11  24   9
T |   0  67   0  67  24   9
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updated Sun Jun 28 12:40:18 2026