interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF LACTOCOCCUS LACTIS ZITR, C30S MUTANT IN COMPLEX WITH DNA
(Zinc transport transcriptional regulator)
referenceSong et al. Proc.Natl.Acad.Sci.USA 114 13661 2017
sourceLactococcus lactis subsp. lactis (strain IL1403) / Lactococcus lactis subsp. lactis (strain IL1403)
experimentX-ray (resolution=2.90, R-factor=0.208)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyMarR family; Bacterial regulatory protein, arsR fam; Iron dependent repressor, Nterminal D;
multimeric complexes5yi2_EF 5yi3_IJ
reference complex5yi2_J
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSPAATK

Estimated binding specificities ?

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# IC=4.450 IC/col=0.742 n_of_columns=6 specificity:   
A |  81   5   6   5  80  80
C |   5   5   5   6   5   6
G |   5  80   5   5   6   5
T |   5   6  80  80   5   5
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updated Thu Sep 12 22:29:27 2024