6f58_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) IN COMPLEX WITH DNA (Brachyury protein)
reference	Burgess-Brown et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.25, R-factor=0.244)
structural superfamily	p53-like transcription factors;
sequence family	Tbox;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6f58_A interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakersh
interface signature	RTAFF

Estimated binding specificities ?

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# IC=4.447 IC/col=0.494 n_of_columns=9

specificity:

A |   6  24  24  24   0  78  12  12   6
C |   6  24  24  24  96   6  66  66   0
G |   6  24  24  24   0   6   6   6   6
T |  78  24  24  24   0   6  12  12  84

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updated Tue Dec 17 04:01:04 2024