6f58_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) IN COMPLEX WITH DNA (Brachyury protein)
reference	Burgess-Brown et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.25, R-factor=0.244)
structural superfamily	p53-like transcription factors;
sequence family	Tbox;
multimeric complexes	6f58_AB 6f59_AB
reference complex	6f59_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6f58_A interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakersh
interface signature	RTAFF

Estimated binding specificities ?

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# IC=4.480 IC/col=0.498 n_of_columns=9

specificity:

A |   5  24  24  24   0  81   6  15   1
C |   6  24  24  24  96   5  65  61   5
G |   5  24  24  24   0   5  10  10   5
T |  80  24  24  24   0   5  15  10  85

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updated Thu Sep 12 23:20:00 2024