interface graph thumbnail
legend  pdf

structure nameTETR FAMILY TRANSCRIPTIONAL REGULATOR CIFR C99T-C107S-C181R CYSTEINES MUTANT COMPLEXED WITH 26BP DOUBLE-STRAND OPERATOR DNA
(Copper outer membrane regulator)
referenceMadden et al. 'To ? ? ?
sourcePseudomonas aeruginosa
experimentX-ray (resolution=2.80, R-factor=0.229)
structural superfamilyTetracyclin repressor-like, C-terminal domain;Homeodomain-like;
sequence familyBacterial regulatory proteins, tetR family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRLRPPSY

Estimated binding specificities ?

contactlogo
# IC=9.376 IC/col=0.938 n_of_columns=10 specificity:   
A |  96   0  67   9  69  96  96  24  96  96
C |   0   0   9  69   9   0   0  24   0   0
G |   0   0  11   9   9   0   0  24   0   0
T |   0  96   9   9   9   0   0  24   0   0
scan!

home
updated Tue Dec 17 06:01:17 2024