3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

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updated Tue Jan 6 09:36:59 2026

structure name	CRYSTAL STRUCTURE OF THE ORC1 BAH DOMAIN IN COMPLEX WITH A NUCLEOSOME CORE PARTICLE
reference	De Ioannes et al. 'Nat 10 2894 2019
source	XENOPUS LAEVIS
experiment	X-ray (resolution=3.30, R-factor=?)
structural superfamily	Histone-fold;P-loop containing nucleoside triphosphate hydrolases;Chromo domain-like;Homeodomain-like;lambda repressor-like DNA-binding domains;p53-like transcription factors;
reference complex	5o9g_E 5o9g_F 5o9g_G 5x0y_D 5z3u_A 5zr1_A 6a5l_e 6g0l_M 6ir9_e 6iro_A 6nqa_A 6pww_K 6r25_E 6r8y_H 6x0n_f 6yov_C 7at8_D 7ea8_A 7eg6_A 7egp_S 7nkx_a 7nkx_f 7otq_E 7u0g_M 7unc_a 7und_e 7vdt_B 7xsx_a 7xzx_N 7zs9_e 8aag_A 8atf_Q 8bvw_e 8ceo_r 8cww_A 8g57_E 8he5_a 8jh2_e 8jhf_A 8siy_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6om3_A interface=2,3,4,46, pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger > 6om3_B interface=28, hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg > 6om3_C interface=28, ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk > 6om3_D interface=2, tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa > 6om3_E interface=1,2, RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger > 6om3_F interface=28, hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf > 6om3_G interface=31, akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk > 6om3_H interface=2, tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa