interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURAL MECHANISM OF NUCLEOSOME DYNAMICS GOVERNED BY HUMAN HISTONE VARIANTS H2A.B AND H2A.Z.2.2
(HISTONE H2A-BBD TYPE 23)
sourceHOMO SAPIENS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes3w97_ABCDEFGH 6m4g_ABCDEFGH 6m4h_ABCDEFGH 8jla_ABCDEFGH
redundant complexes3w97 6m4h 8jla
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  HGRTRG--         +-----------------------------8rbx_V    
                 +-8 
  ----RC--       ! +-----------------------------7yqk_C    
                 ! 
  ----RT--       !                             +8u14_G    
                 !                     +-------2 
  ----RG--       !                     !       +8upf_G    
               --9             +-------4 
  ----RARA       !             !       !       +6a5l_g    
                 !        +----5       +-------1 
  ----RG--       !        !    !               +8txv_G    
                 !        !    ! 
  ----RC--       !        !    +---------------7ux9_E    
                 +--------7 
  ----RGRG                !             +------8kcb_A    
                          ! +-----------3 
  ----RA--                +-6           +------7e9c_F    
                            ! 
  ----RT--                  +------------------6px1_A    
               

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updated Sat Jan 10 10:57:23 2026