| structure name | CRYSTAL STRUCTURE OF THE HUMAN PAX-6 PAIRED DOMAIN-DNA COMPLEX REVEALS A GENERAL MODEL FOR PAX PROTEIN-DNA INTERACTIONS (HOMEOBOX PROTEIN PAX-6) |
| reference | Epstein et al. 'Genes 13 1263 1999 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.50, R-factor=0.233) |
| structural superfamily | Homeodomain-like; |
| sequence family | 'Paired box' domain; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | NRSNCSKISRSVSSNRR |
Estimated binding specificities ?
| readout + contact |  |
A | 5 5 80 5 24 24 24 5 24 0 0 0 C | 5 81 5 80 24 24 24 10 24 96 6 0 G | 81 5 6 6 24 24 24 5 24 0 85 0 T | 5 5 5 5 24 24 24 76 24 0 5 96scan! |
Dendrogram of similar interfaces ?
matrix format--RC----IAQCNAYC-- L +---3rkq_B +--------------------3 ----RT--NT--NAIARG L ! +---4cyc_B --4 --RT--QTVAQTNA---- L ! +8osb_E ! +--1 --------IAQTNA---- L +---------------------2 +5ego_B ! RT------IAQCNAMG-- L +--1b72_A |
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updated Sat Jan 10 11:12:42 2026