| structure name | E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 1 (DNA GYRASE SUBUNIT A) |
| source | ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) |
| experiment | NMR |
| structural superfamily | Type II DNA topoisomerase; |
| sequence family | DNA gyrase/topoisomerase IV, subunit A; |
| multimeric complexes | 6rks_AB 6rks_CD 6rku_AB 6rku_CD 6rkv_AB 6rkv_CD 6rkw_AB 6rkw_CD 7z9c_AB 7z9c_CD 7z9g_AB 7z9g_CD 7z9k_AB 7z9k_CD 7z9m_AB 7z9m_CD |
| redundant complexes | 6rkw 6rkv 6rks |
| reference complex | 6rks_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------------------------------IG-------------------------- +-6rku_A +------------10 ----RC----STSA----------RG----IC-------------------------- ! +-3k9f_B ! YT----------ST------------RA--IG-------------------------- ! +5bs8_A ! +-5 YC----------SG----------RT----IG-------------------------- ! ! ! +5iwi_C ! ! +-2 ------------SA----------RG----IG--QT---------------------- L ! +-6 +5npk_d ! ! ! ------------------------------IA-------------------------- +-----------16 ! ! +4z2c_B ! ! +-7 +-1 ------------SA----------RG----IG-------------------------- ! ! ! ! +2xcr_U ! ! +--8 ! ------------SA----------RG----IC-------------------------- L ! ! ! ! +4z4q_B ! ! +----13 ! ----RC------AT----------------IC--------------RG---------- L ! ! ! ! +2xkk_C ! ! ! ! ----------SGAA----------------IC--------------RA---------- L ! ! ! +---6waa_D ! +----14 ------------AG----------RT--ECIGAG------------------------ +-17 ! +3qx3_B ! ! ! +-9 --DC------------------------ECIGSG------------------------ L ! ! +------12 +4fm9_A ! ! ! ------------SA--------------EGIGSC------------------------ ! ! +-3l4j_A ! ! ------------------RGHTST---------------------------------- L ! ! +-6akp_C ! ! +---------11 --------------NGSARGHGSC---------------------------------- L +-18 ! ! ! +6el8_A ! ! ! ! +-3 --------------NASTRGHTST---------------------------------- L ! ! +--------------15 +7cby_C ! ! ! --------RCQG--------------SG------------------------------ ! ! ! +4qlc_U +-19 ! +------------4 ------PG-------------------------------------------------- ! ! ! +6la8_S ! ! ! ------------------------------------------------NTATATSTRG L -20 ! +----------------------------1dh3_C ! ! ------------------------------------------------NTATAT--RG L ! +-----------------------------5t01_B ! ------------------------------------NCKGCAYTRC------------ L +-----------------------------1jj4_B |
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updated Mon Dec 18 17:49:21 2023