6vbw_D : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF CASCADE-TNIQ-DSDNA TERNARY COMPLEX
experiment	NMR
sequence family	CRISPRassociated protein Cas_Csy3;
multimeric complexes	6lnb_BCDEFG 6pij_AG 6pij_BCDE 6vbw_BCDEFG
redundant complexes	6lnb_B 6pij
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6vbw_D interface=6,40,44,69,70,71,102,227,229,230,231,234,337,339, mklptNlayersidpsdvcffvvwpddrktpltynsrtlLgqmEaaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpyKcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtEKTqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQhk
interface signature	NLENPHKFEKTSMQ

Estimated binding specificities ?

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# IC=6.878 IC/col=0.625 n_of_columns=11

specificity:

A |  45  96   0  21  24  24  67  96  24   2   0
C |  16   0   0  31  24  24  11   0  24  88   0
G |  16   0  96  23  24  24   9   0  24   2  96
T |  19   0   0  21  24  24   9   0  24   4   0

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updated Sat Jan 10 12:22:40 2026