6vgg_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE DNA BINDING DOMAINS OF HUMAN TRANSCRIPTION FACTOR ERG, HUMAN RUNX2 BOUND TO CORE BINDING FACTOR BETA (CBFB), AND MITHRAMYCIN, IN COMPLEX WITH 16MER DNA CAGAGGATGTGGCTTC (TRANSCRIPTIONAL REGULATOR ERG)
reference	Tsodikov et al. Structure 29 404 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=4.31, R-factor=0.253)
structural superfamily	"Winged helix" DNA-binding domain;
sequence family	Etsdomain;
multimeric complexes	5jvt_AD 6vg8_AD 6vgd_AD 6vge_AD 6vgg_AD
reference complex	4iri_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6vgg_A interface=60,63,66,67, mpgsgqiqlwqfllellsdssnsscitwegtngefkmtdpdevarrwgerkskpnmnydKlsRalRYyydknimtkvhgkryaykfdfhgiaqalqph
interface signature	KRRY

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# IC=5.807 IC/col=0.968 n_of_columns=6

A |  13  96   0   0  96  13
C |  13   0   0   0   0  16
G |  57   0  96  96   0  13
T |  13   0   0   0   0  54

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updated Fri Sep 13 02:35:33 2024