interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HELICASE PIF1 FROM THERMUS OSHIMAI IN COMPLEX WITH OLIGO GGTTTGGTTTGGTT
(PIF1 helicase)
referenceChen et al. 'Nucleic 49 4129 2021
sourceThermus oshimai JL-2
experimentX-ray (resolution=2.21, R-factor=0.181)
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;
multimeric complexes7bil_AB 7oar_AB
reference complex6s3h_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHPARVPRRWHF

Estimated binding specificities ?

contactlogo
# IC=6.290 IC/col=1.048 n_of_columns=6 specificity:   
A |   0   0   0   4   0  14
C |   0   0   0   4   0  14
G |   0   0  96  81   0  16
T |  96  96   0   7  96  52
scan!

home
updated Mon Dec 18 19:47:17 2023