interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HELICASE PIF1 FROM THERMUS OSHIMAI IN COMPLEX WITH ADP-ALF4 AND (DT)7DS11BP
(PIF1 helicase)
referenceChen et al. 'Nucleic 49 4129 2021
sourceThermus oshimai JL-2
experimentX-ray (resolution=2.06, R-factor=0.201)
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;
multimeric complexes7bil_AB 7oar_AB
redundant complexes6s3m_A 6s3n_A 7bil_B 7oar_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHAREVPERFPWKF

Estimated binding specificities ?

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# IC=7.720 IC/col=1.287 n_of_columns=6 specificity:   
A |   0   0   0   0   2   0
C |   0   0   0   0   2   0
G |   0   0   0   0   2   0
T |  96  96  96  96  90  96
scan!

Dendrogram of similar interfaces ?

matrix format

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updated Fri Sep 13 23:37:00 2024