Estimated binding specificities ?

structure nameANALYSIS OF A STRAND EXCHANGE REACTION WITH A MINI FILAMENT OF 9- RECA, OLIGO(DT)27 PRIMARY SSDNA, NON-HOMOLOGOUS 120 BP DSDNA AND ATPGAMMAS
(Protein RecA)
referenceNature 586 801 2020 C10 H16 N5 O12 P3 S
sourceEscherichia coli
experimentX-ray (resolution=2.50, R-factor=0.288)
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;RecA protein, C-terminal domain;
sequence familyrecA bacterial DNA recombination protein;
multimeric complexes7jy6_ABCDEFGHI 7jy7_AB 7jy8_ABCDEF 7jy8_GHI 7jy9_AB 7jy9_HI
reference complex8trg_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
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# IC=4.506 IC/col=0.563 n_of_columns=8 specificity:   
A |   4   0  24  24   2  24  24   0
C |   4   0  24  24   2  24  24   0
G |   4   0  24  24   4  24  24   0
T |  84  96  24  24  88  24  24  96
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updated Fri Sep 13 04:11:16 2024