3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Wed Sep 11 06:38:20 2024

structure name	ANTIBODY AND NUCLEOSOME COMPLEX
source	SACCHAROMYCES CEREVISIAE
experiment	NMR
structural superfamily	Histone-fold;lambda repressor-like DNA-binding domains;p53-like transcription factors;Nucleic acid-binding proteins;P-loop containing nucleoside triphosphate hydrolases;
reference complex	5o9g_F 6ftx_B 6r8y_H 6x0n_f 7e9c_D 7e9c_G 7k78_E 7nkx_f 7u0g_M 7vdt_B 7xcr_F 7xzx_N 7xzz_N 8xgc_4
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7k78_A interface=23,44, pselalyeirkyqrstdlliskIpfarlvkevtdefttkdqdlRwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqf > 7k78_B interface= dniqgitkpairrlarrggvkrIsgliyeevravlksflesviRdsvtytehakrktvtsldvvyalkrqgrtlygfgg > 7k78_C interface=30, asqsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihq > 7k78_D interface= arketyssyiykvlkqthpdtgisqksmsIlnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkyssst > 7k78_E interface=25,46, ytpselalyeirkyqrstdlliskIpfarlvkevtdefttkdqdlRwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqfi > 7k78_F interface=23, rdniqgitkpairrlarrggvkRisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg > 7k78_G interface=29, sqsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihq > 7k78_H interface=1, Rketyssyiykvlkqthpdtgisqksmsilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkyssst