Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF THE 1:1 ORC1 BAH DOMAIN IN COMPLEX WITH NUCLEOSOME
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes1id3_ABCDEFGH 4jjn_ABCDEFGH 4kud_ABCDEFGH 6uph_ABCDEFGH 7e9c_ABCDEFGH 7e9f_ABCDEFGH 7k78_ABCDEFGH 7k7g_ABCDEFGHM 7on1_abcdefgh
redundant complexes1id3_C 4jjn 4kud 6uph 7e9f 7k78 7k7g 7on1 7ssa 8xgc
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ----RG--       +-----------------------------8upf_G    
                 ! 
  ----RARA       !                               +6a5l_g    
                 !                             +-1 
  ----RG--       !              +--------------3 +8txv_G    
                 !              !              ! 
  ----RC--     --9            +-6              +7yqk_C    
                 !            ! ! 
  ----RT--       !            ! !             +8u14_G    
                 !     +------7 +-------------4 
  HGRTRG--       !     !      !               +8rbx_V    
                 !     !      ! 
  ----RA--       +-----8      +----------------7e9c_F    
                       ! 
  ----RA--             !                       +7xsx_a    
                       !        +--------------2 
  ----RC--             +--------5              +7ux9_E    
                                ! 
  ----RT--                      +--------------6px1_A    
               

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updated Sat Jan 10 14:58:13 2026