7e9c_G : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF THE 1:1 ORC1 BAH DOMAIN IN COMPLEX WITH NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes	1id3_ABCDEFGH 4jjn_ABCDEFGH 4kud_ABCDEFGH 7e9c_ABCDEFGH 7e9f_ABCDEFGH 7k78_ABCDEFGH 7k7g_ABCDEFGHM
redundant complexes	1id3 4jjn 4kud 7e9f 7k78 7k7g 7ssa 8xgc
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7e9c_G interface=28, qsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnll

  
  --RG----       +---------------------------8ox0_C    
                 !  
  --RG----       !                             +8txv_G    
                 !                           +-1 
  --RA----       !                 +---------4 +1zla_C    
                 !                 !         ! 
  --RA--RA     -11              +--6         +6a5l_g    
                 !              !  ! 
  --RT----       !              !  !         +8u14_G    
                 !   +----------7  +---------2 
  --RG----       !   !          !            +5x0y_G    
                 !   !          ! 
  --RG----       !   !          +------------8jla_C    
                 +--10  
  --RC----           !                   +---6qld_f    
                     !      +------------5 
  ----RA--           !      !            +---6g0l_D    
                     +------9 
  --RA----                  !                +7xsx_a    
                            ! +--------------3 
  --RT----                  +-8              +8grq_A    
                              ! 
  LCRT----                    +--------------8hr1_E

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updated Wed Dec 18 08:42:53 2024