7oar_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HELICASE PIF1 FROM THERMUS OSHIMAI IN COMPLEX WITH PARALLEL G-QUADRUPLEX (Pif1 helicase)
reference	Chen et al. 'Embo 23 e53874 2022
source	Thermus oshimai
experiment	X-ray (resolution=2.58, R-factor=0.197)
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;
multimeric complexes	7bil_AB 7oar_AB
reference complex	6s3h_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7oar_A interface=66,73,151,153,238,262,290,293,299,327,329,330,331,354,367,386, eglsseqqraflavtqtphpahlitgpagtgkttllyalqkfykgravtlaptgtaalqargqtvHsffrfpArllryrhpedirppgphsplrkaieqmevlildevgmvrvdlleamdwalrktrkrleepfggvkvlllgdtrqlepVvPggeealyiartwggpfffqahvweevalrvhrlwesqrqredplfaellkrlrqgdpqaletlnraavrpdggeepgtliltprRkeadalnlkrlealpgkpleyqaQvkgefaetdfpteaaltlkkgaqvillRndPlgeyfNgdlgwvedleaealavrlkrngrrvviRpFVWekivytydsereeikpqvvgtfRqvpvrlawaltvHkaqgltldkvhlelgrglFahgqlyvaltrvrrlqdlslsrpiaptellwrpevevfetriqegiwqkshgwpsl
interface signature	HAVPRQRPNRFVWRHF

Estimated binding specificities ?

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# IC=11.143 IC/col=0.586 n_of_columns=19

specificity:

A |  19   0   0   4   0   0   0  24  24  24   0  24  24  24   2  24  24  24   0
C |  19   0   0   4   0   0   0  24  24  24   0  24  24  24   4  24  24  24   0
G |  19   0   0   7   0   0  96  24  24  24  96  24  24  24  88  24  24  24  96
T |  39  96  96  81  96  96   0  24  24  24   0  24  24  24   2  24  24  24   0

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updated Tue Dec 17 10:44:28 2024