7uy7_E : 3D-footprint complex

structure name	TETRAHYMENA CST WITH POLYMERASE ALPHA-PRIMASE
experiment	NMR
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family B; DNA polymerase family B, exonuclease do 231;
multimeric complexes	7uy7_ABE
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7uy7_E interface=340,342,345,346, vkkindyknedgsvdaylydyfydaqvkpdkiyafakvqnkqtnafdtcviqidtiirnlffypssdtvteqqikneiaellkkeqtsrknveflgafvdknyafelpiprgksrwyqvvmsyeyevispdtkgqyfsystysaletflitkkitgpswvrfqnvkdttscitnrklefrvdytnqsniqvlqkqlptpplsvvcislktsqqivlsqkkkeykkeifnlnmkyheginidnsnkdelnqfksisfithidptkkqdsitkkgtlpettkfclnelnlleqflvhfneidpdivvahdlystvfeiiltrirekgirkwnllsklinigSsDipKYgsstfktkmamkgrllvdtllssqefvncveytlealaqklfkieipridakayqqkfatykllnslvddtyqdidyalrimyhlqivpltkqltsicgniwmgslqnqraernemlllhkfnqlnyvypdnfknlpesykkkhknaqirkqyeedkglyneyivlldfnslypsiiqefnvcfttcvrdpiplemqmapflgnkiaplpsilqylveqrkvvknqikgqkdpqvietldikqkafklvansmygclgfsssrfyamplasfitakgrhilfdskkivedmgysviygdtdslmikpgtnefleavktglsikikvnskykklqldidgvfknmlllkkkkyatlkvanweevekeikglsrdagnkileiileskssenmlddikkyliqlnddlqyykrfqlfepikrmlevieginlqeiasil

No structural evidence for specific binding to DNA (<4 informative columns)

Dendrogram of similar interfaces ?

matrix format

  
  --IT----------------------QGQAVT--FTITIGNGSGYGFT--VAKTLTKARG   L              +------------3iay_A    
                                                                     +----------1 
  --------------DG--FA----FG------------------------WC----KT--       !          +------------2dtu_A    
                                                                   --3 
  PI--NTNTFC--YT--RG--WGDG--------WG--------------------------   L   ! +---------------------2xhb_A    
                                                                     +-2 
  ----------RT--------------RC----------LC--SCYG--FAYA----KA--   L     +---------------------8g9l_A

home
updated Wed Dec 18 13:30:08 2024