| structure name | CRYSTAL STRUCTURE OF THE BETA HAIRPIN LOOP DELETION VARIANT OF RB69 GP43 IN COMPLEX WITH DNA CONTAINING AN ABASIC SITE ANALOG (DNA polymerase) |
| reference | Konigsberg et al. J.Biol.Chem. 282 1432 2007 |
| source | Enterobacteria phage RB69 |
| experiment | X-ray (resolution=2.37, R-factor=?) |
| structural superfamily | DNA/RNA polymerases;Ribonuclease H-like; |
| sequence family | DNA polymerase family B, exonuclease do; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix formatSGFGMG----------------------FGKGVGIG---------------------------- +----------2dtu_A +---------1 ----------FTQT------RTSG--------------IGNGAGYG--AA--KA--RG--RCNA L +---2 +----------3k59_A ! ! ------IT--------------QGQAVTFT----ITQTIGNGSGYGFT--LTKARGRC----NC L +---3 +--------------------3iay_A ! ! ----------------RC---------------------------------------------- +-4 +------------------------2vwj_A ! ! --------LC----MG--RC-------------------------------------------- --5 +----------------------------1kln_A ! ----------------------------------------------------------LT---- +----------------------------2py5_B |
home
updated Tue Dec 17 22:40:18 2024