interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE NPAS4-ARNT HETERODIMER IN COMPLEX WITH DNA
referenceJing et al. 'to ? ? ?
experimentX-ray (resolution=4.71, R-factor=0.316)
structural superfamilyPYP-like sensor domain PAS domain;HLH, helix-loop-helix DNA-binding domain;
sequence familyPAS fold; Helixloophelix DNAbinding domain;
multimeric complexes4zpk_AB 4zpr_AB 5sy7_AB 7xi4_AB
reference complex4zpk_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHERR

Estimated binding specificities ?

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# IC=3.142 IC/col=0.786 n_of_columns=4 specificity:   
A |  13   0   0  13
C |  57   0   0  16
G |  13  96   0  54
T |  13   0  96  13
scan!

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updated Fri Sep 13 08:42:16 2024