interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF DNA BOUND SALL4
(Sal-like protein 4)
referenceRu et al.
sourceHomo sapiens
experimentX-ray (resolution=2.45, R-factor=0.197)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
multimeric complexes7y3i_AC 7y3i_BD 7y3k_AB 8cuc_FH
redundant complexes7y3k
reference complex8cuc_F
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  DG--YCKGRGTCQA----TC----   L   +-----------------------------5t0u_A    
                                 ! 
  ----SA------TT----NAVTRT       !                             +7y3m_I    
                               --4                         +---1 
  RG--DCKG--------YC------   L   !                     +---2   +7eyi_G    
                                 !                     !   ! 
  ECYTSGSTKG--QA----SA----   L   +---------------------3   +---6wmi_A    
                                                       ! 
  LT--ECYC----NTYGQGFT----   L                         +-------2lt7_A    
                               

home
updated Fri Sep 13 09:08:38 2024