interface graph thumbnail
legend  pdf

structure nameHOXB13-HOMODIMER BOUND TO DNA
(Homeobox protein Hox-B13)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=3.00, R-factor=0.256)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes5eg0_AB 5ego_AB 5no6_AN 5no6_BI 8byx_AK 8byx_BJ 8byx_GL
reference complex7psx_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNK

Estimated binding specificities ?

readout + contactlogo
# IC=8.652 IC/col=0.961 n_of_columns=9 specificity:   
A |   6  12   5  96   0  91   0   5   5
C |   5   5   5   0   0   0   0   5   5
G |   5   5   5   0   0   0  96  76   5
T |  80  74  81   0  96   5   0  10  81
scan!

home
updated Tue Dec 17 15:49:17 2024