8d0b_A : 3D-footprint complex

structure name	HUMAN CST-DNA POLYMERASE ALPHA/PRIMASE PREINITIATION COMPLEX BOUND TO 4XTEL-FOLDBACK TEMPLATE (CST COMPLEX SUBUNIT CTC1)
source	HOMO SAPIENS
experiment	NMR
multimeric complexes	8d0b_ABF 8d0k_ABCDEF
redundant complexes	8d0k
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8d0b_A interface=849,851,872,874,898,902,904,906,908,910,958,997,999,1006,1008,1043,1047,1076,1079,1087,1089,1091,1105,1107, psseqawledaqvfiqktlcpavkepnvqltplvidcvktvwlsqgrnqgstlplsysfvsvqdlkthqrlpccshlswsssayqawaqeagpngnplpreqllllgtltdlsadleqecrngslyvrdntgvlscelidldlswlghlflfprwsylpparwnssgeghlelwdapvpvfpltispgpvtpipvlypesascllrlrnklrgvqrnlagslvrlsalvkskqkayfilslgrshpavthvsiivqvpaqlvwhralrpgtayvltelrvskirgqrqhvwmtsqssrllllkpecvqevrysrllsysgavtgvlnepaglyeldgqlglclayqqfrglrrvmrpgvclqlqdvhllqsvgggtrrpvlapclrgavllqsfsrqkpgahssrqaygaslyeqlvwerqlglplylwatkaleelacklcphvlrhhqflqhsspgspslglqllaptldllappgspvrnahneileephhcplqkytrlqtpssfptlatlkeegqrkawasfdpkallplpeasylpscqlnrrlawswlcllpsafcpaqvllgvlvasshkgclqlrdqsgslpclllakhsqplsdprligclvraerfqliverdvrssfpswkelsmpgfiqkqqarvyvqffladalilpvprpgqsrlfllchkealmkrnfcvppgaspevpkpalsfyvlgswlggtqrkegtgwglpepqgnddndqkvhliffgssvrwfeflhpgqvyrlvapgpatpmlfekdgsscisrrplelagcascltvqdnwtlelessqdiqdvldankslpessltdllsdnftdslvsfsaeilsrtlcepRrCvkltvaletaecefpphldvYiEdphlppslgllpgarvhfsqlekRvsrShNvYcCfRsstyvqvlsfppettisvplphiylaellqggqspfqataschivsvFslqlfwvcayctsicrqgkctrlgstcptqtaisqaiiRlLvedgtaEaVvtcrnhhvaaalglcprewaslldfvqvpgrvvlQfagPepmtmflwtlctspsvlrpivlsfelerKpsKivpleppRlQrFqcgelpflthvnpRlRlsclsires
interface signature	RCYERSNYCRFRLEVQPKKRQFRR

Estimated binding specificities ?

contact

# IC=9.328 IC/col=0.848 n_of_columns=11

specificity:

A |   0  96   0  24  24  24  24  96   0   0   0
C |   0   0   0  24  24  24  24   0   0   0   0
G |   0   0  96  24  24  24  24   0  96  96  96
T |  96   0   0  24  24  24  24   0   0   0   0

scan!

Dendrogram of similar interfaces ?

matrix format

  
  ------------------------------------------------YTYGRTLGKGRTMTFTKG   L     +-----------------------------6d6v_D    
                                                                           +-2 
  ------------------RTKTATTTWTRTRTITYT--NTNTMTQTLT------------------   L   ! !                             +6irq_A    
                                                                         --3 +-----------------------------1 
  RTQTSTATNTQTTTWTRT------------------------------------------------   L   !                               +8uzt_A    
                                                                           ! 
  ------------------------------------AA----------------------------   L   +-----------------------------7ypo_D

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updated Tue Jun 30 14:46:51 2026