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structure nameCRYO-EM STRUCTURE OF THE HERMES TRANSPOSASE BOUND TO TWO LEFT-ENDS OF ITS DNA TRANSPOSON
experimentNMR
structural superfamilyRibonuclease H-like;Hermes dimerisation domain;beta-beta-alpha zinc fingers;
sequence familyHermes transposase DNAbinding domain; hAT family dimerisation domain; BED zinc finger;
multimeric complexes8edg_CGK 8sjd_AC 8sjd_BD
redundant complexes8sjd_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRQTSNRSW

Estimated binding specificities ?

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# IC=4.434 IC/col=0.317 n_of_columns=14 specificity:   
A |  16  96   0   0  24  24  24  24  24  24  24  24  24  16
C |  13   0  96   0  24  24  24  24  24  24  24  24  24  13
G |  13   0   0   0  24  24  24  24  24  24  24  24  24  13
T |  54   0   0  96  24  24  24  24  24  24  24  24  24  54
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updated Sun Aug 3 23:57:20 2025