interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE HOMEODOMAIN OF PLATYPUS SDUX IN COMPLEX WITH DNA
(Homeobox domain-containing protein)
referenceAihara et al. Iscience 26 107823 2023
sourceOrnithorhynchus anatinus
experimentX-ray (resolution=2.67, R-factor=0.225)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes8ejo_AB 8ejp_AB
reference complex8ejp_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRVQNR

Estimated binding specificities ?

readout + contactlogo
# IC=2.398 IC/col=0.599 n_of_columns=4 specificity:   
A |  14   7   0  71
C |  16  11   1   4
G |  21  12  95  17
T |  45  66   0   4
scan!

home
updated Fri Sep 13 10:44:52 2024