interface graph thumbnail
legend  pdf

structure nameHSV-1 DNA POLYMERASE-PROCESSIVITY FACTOR COMPLEX IN EXONUCLEASE STATE
referenceGustavsson et al. 'Nucleic 52 7292 2024
experimentX-ray (resolution=1.87, R-factor=?)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family B; DNA polymerase family B, exonuclease do;
multimeric complexes8oj7_AB 8oja_AB 9enp_AB
redundant complexes7luf_B 8oj6_A 8ojd_A 9enp_A 8oj7
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ------IT----------------------------QGQAVT--FT--IGNGSGYGFT--VAKTLTKARG--   L                +----------------3iay_A    
                                                                                          +---1 
  PIPIVIIIPGFIKGRINTNTFCQGMGDAYTRGWGDG------WG----------------------------   L   +--------2   +----------------2xhb_A    
                                                                                 !        ! 
  --------------------------RT--------RC----------LC--SCYG--FAYA--------RG   L --3        +--------------------8g9l_A    
                                                                                 ! 
  ----------------------------------------------RC------------------------       +-----------------------------8wpe_G    
                                                                               

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updated Sun Jan 11 00:43:56 2026