Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameCLOCK-BMAL1 BOUND TO THE NATIVE POR NUCLEOSOME
experimentNMR
structural superfamilyHLH, helix-loop-helix DNA-binding domain;
sequence familyHelixloophelix DNAbinding domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----HGNT----ET----RG--   L       +-----------------------------6g1l_A    
                                 +-1 
  ----HT----STEC--RTRGRT   L   +-2 +-----------------------------7xq5_A    
                               ! ! 
  NTNG--RTECRG--RC------   L --3 +-----------------------------6od3_F    
                               ! 
  ------NT----ET--RCMT--       +-----------------------------2ql2_D

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updated Wed Dec 18 18:57:46 2024