interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX WITH RAD26 AND ELF1 (CLOSED STATE)
experimentNMR
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;
sequence familySNF2 family Nterminal domain; Helicase conserved Cterminal domain;
multimeric complexes5vvr_ABEM 8tvy_ABEM
redundant complexes5vvr
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureDSENTQVNQNKRD

Estimated binding specificities ?

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# IC=3.142 IC/col=0.628 n_of_columns=5 specificity:   
A |  13   0   0  24  13
C |  13  96   0  24  13
G |  54   0   0  24  13
T |  16   0  96  24  57
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Dendrogram of similar interfaces ?

matrix format
  
  --------------RC       +-----------------------------6ryu_V    
                       --3 
  --EG--------SCRG   L   ! +---------------------------6kw4_Y    
                         +-2 
  --ETNG--WGRA----   L     !                           +7aud_E    
                           +---------------------------1 
  RT----QT--------   L                                 +5vhe_A

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updated Tue Jun 30 18:17:00 2026