1hf0_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF OCT-1 BOUND TO DNA AS A DIMER (OCTAMER-BINDING TRANSCRIPTION FACTOR 1)
reference	Scholer et al. Mol.Cell 8 569 2001
source	HOMO SAPIENS
experiment	X-ray (resolution=2.70, R-factor=0.239)
structural superfamily	lambda repressor-like DNA-binding domains;Homeodomain-like;
sequence family	Pou domain Nterminal to homeobox domain;
multimeric complexes	1cqt_AI 1cqt_BJ 1gt0_CD 1hf0_AB 1o4x_AB
reference complex	1o4x_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hf0_B interface=22,38,39,40,43,44,71,74,116,119,120,123, leeleqfaktfkqrriklgftQgdvglamgklygndfSQTtiSRfealnlsfknmsklkpllekwlndaeRkkRtsietnirvaleksflenqkptseeitmiadqlnmekevirVwfSNrrQkekri
interface signature	QSQTSRRRVSNQ

Estimated binding specificities ?

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# IC=9.065 IC/col=1.007 n_of_columns=9

specificity:

A |   0   8   0   8   0   0  56  96  96
C |  88   8   0   0   0   0   8   0   0
G |   0  64   0  16   0  96  24   0   0
T |   8  16  96  72  96   0   8   0   0

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updated Sun Jun 28 03:36:46 2026