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structure nameCRYSTAL STRUCTURE OF THE OCT-1 POU DOMAIN BOUND TO AN OCTAMER SITE: DNA RECOGNITION WITH TETHERED DNA-BINDING MODULES
referenceKlemm et al. 'Cell(Cambridge,Mass.)' 77 21 1994
experimentX-ray (resolution=3.00, R-factor=0.237)
structural superfamilylambda repressor-like DNA-binding domains;Homeodomain-like;
sequence familyPou domain Nterminal to homeobox domain;
multimeric complexes1cqt_AI 1cqt_BJ 1gt0_CD 1hf0_AB 1o4x_AB
reference complex1o4x_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSQTSRLRRVCN

Estimated binding specificities ?

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# IC=8.367 IC/col=0.930 n_of_columns=9 specificity:   
A |  96  11  33   4   0   4  87   0  62
C |   0   4   9   0   0  91   0   0   4
G |   0  57   4   0  96   1   9   0  16
T |   0  24  50  92   0   0   0  96  14
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updated Thu Sep 12 15:03:49 2024