structure name | CRYSTAL STRUCTURE OF THE COMPLEX OF HMG-D AND DNA (HIGH MOBILITY GROUP PROTEIN D) |
reference | Churchill et al. 'EMBO 18 6610 1999 |
source | Drosophila melanogaster |
experiment | X-ray (resolution=2.20, R-factor=0.238) |
structural superfamily | HMG-box; |
sequence family | HMG high mobility group box; |
multimeric complexes | 1qrv_AB |
redundant complexes | 1e7j_A |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | RSYMLRVTA |
Estimated binding specificities ?
contact |
A | 19 24 0 96 0 0 C | 20 24 0 0 0 76 G | 38 24 0 0 0 1 T | 19 24 96 0 96 19scan! |
Dendrogram of similar interfaces ?
matrix formatKCRC--YTMALTRA--VCTG--AAVCEC L +-1qrv_A +-------1 --RC--FAFTCG----IC--VGAG---- L +----2 +-2gzk_A ! ! --RGNTFTMA--RT--NGRT--SA---- L +------3 +---------7m5w_A ! ! --RCNTFTMA--RAHGNT----SA---- L --4 +--------------3f27_D ! ------YA--------FT----SG---- +---------------------5ze0_N |
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updated Fri Sep 13 15:57:00 2024