| structure name | CRYSTAL STRUCTURE OF THE HMG-C1 DOMAIN OF HUMAN CAPICUA BOUND TO DNA (PROTEIN CAPICUA HOMOLOG) |
| reference | Dowling et al. Biorxiv ? ? 2022 |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.95, R-factor=0.211) |
| structural superfamily | HMG-box; |
| sequence family | HMG high mobility group box; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RNFMRNRSWNLREQ |
Estimated binding specificities ?
| readout + contact |  |
A | 12 0 96 96 0 0 60 C | 12 12 0 0 0 0 12 G | 12 84 0 0 0 96 12 T | 60 0 0 0 96 0 12scan! |
Dendrogram of similar interfaces ?
matrix formatRGNTFTMA--RT--NGRT--SA------------WANTLARTETQT L +--------------7m5w_A +-----3 RCNTFTMA--RAHGNT----SA------------YA---------- L ! ! +3f27_D ! +--------------1 RCNAFTIA--RG--NC----SA--LT----YAKT------------ L --4 +2gzk_A ! RC--YTMALTRA--VCTG--AA----VCEC---------------- L ! +---------1qrv_A +----------2 ----YA------------FT--SG---------------------- +---------5ze0_N |
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updated Sat Sep 14 03:15:21 2024