structure name | SOLUTION STRUCTURE OF THE CDC13 DNA-BINDING DOMAIN COMPLEXED WITH A SINGLE-STRANDED TELOMERIC DNA 11-MER (CELL DIVISION CONTROL PROTEIN 13) | |
source | SACCHAROMYCES CEREVISIAE | |
experiment | NMR | |
structural superfamily | Nucleic acid-binding proteins; | |
sequence family | CDC13, ssDNA binding; | |
links to other resources | NAKB PDIdb DNAproDB | |
protein sequence |
site | source | matches (E-value) |
---|---|---|
term: CDC13 | ||
GTGTGGGTGTG | PubMed | 1s40_A(3.22e-12) |
Dendrogram of similar interfaces ?
matrix format----EGTGYGSGDGKGATFTSGVGNGYTLGYG------YG------KG----YT------------RGDGNG------KT--YG----NGAG--RT---------- L +-1s40_A +--------------------1 KTFT----YT--------------NTYT--YADGFGSGFGRGET--HA--LTYT--NTRTITMTDT--NG----RG--KTQGFG--KANT--VTLT--EALATGRT L +--2 +-6lbr_A ! ! --------YT------------------------------------------YGDG--------------------------------------RT---------- L +-3 +----------------------3kjp_A ! ! --------QT----------------------------------------RT------------------------LTTTKTFTQT------ST--HT-------- +-4 +-------------------------4gnx_B ! ! --------------------------------------------QC--HC----------------------------TGRAYC---------------------- L --5 +--------------------------1qzh_E ! ----------------------------------------------WT--TTFT------------------MT--RTRT------RTRT---------------- L +---------------------------6i52_C |
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updated Fri Sep 13 15:59:35 2024