interface graph thumbnail
legend  pdf

structure nameSERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA
(PROTEIN SERUM RESPONSE FACTOR SRF)
referencePellegrini et al. Nature 376 490 1995
sourceHomo sapiens
experimentX-ray (resolution=3.20, R-factor=0.228)
structural superfamilySRF-like;
sequence familySRFtype transcription factor DNAbinding a;
multimeric complexes1hbx_ABG 1hbx_DH 1k6o_ABC 1srs_AB
reference complex1hbx_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTRTSK

Estimated binding specificities ?

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# IC=5.023 IC/col=0.837 n_of_columns=6 specificity:   
A |   9   0  81   0   7   7
C |   7   0   7   0   9  66
G |   7   0   7  96  73  16
T |  73  96   1   0   7   7
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updated Thu Sep 12 15:31:56 2024