interface graph thumbnail
legend  pdf

structure nameSERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA
(PROTEIN SERUM RESPONSE FACTOR SRF)
referencePellegrini et al. Nature 376 490 1995
sourceHomo sapiens
experimentX-ray (resolution=3.20, R-factor=0.228)
structural superfamilySRF-like;
sequence familySRFtype transcription factor DNAbinding a;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTRTSK

Estimated binding specificities ?

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# IC=4.960 IC/col=0.827 n_of_columns=6 specificity:   
A |   7   7   0   7  96  73
C |   7  73  96   7   0   9
G |  73   9   0   7   0   7
T |   9   7   0  75   0   7
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updated Mon Dec 16 18:52:41 2024