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structure nameDNA BINDING DOMAIN OF EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA (CRYSTAL FORM I)
(Transcription factor COE1)
referenceGrosschedl et al. 'Genes 24 2270 2010
sourceMus musculus
experimentX-ray (resolution=3.01, R-factor=0.224)
multimeric complexes3mln_AB 3mlo_AB
reference complex3mln_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSNRNANNNSK

Estimated binding specificities ?

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# IC=8.385 IC/col=0.699 n_of_columns=12 specificity:   
A |  14  24  24  24   0   0   0   0  62  96   4  79
C |  57  24  24  24   0   0   0   0  11   0  16   9
G |   9  24  24  24   0  96  96  96   9   0  14   4
T |  16  24  24  24  96   0   0   0  14   0  62   4
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updated Thu Sep 12 17:43:30 2024