interface graph thumbnail
legend  pdf

structure nameDNA BINDING DOMAIN OF EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA (CRYSTAL FORM I)
(Transcription factor COE1)
referenceGrosschedl et al. 'Genes 24 2270 2010
sourceMus musculus
experimentX-ray (resolution=3.01, R-factor=0.224)
multimeric complexes3mln_AB 3mlo_AB
reference complex3mln_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSNRNANNNSK

Estimated binding specificities ?

readout + contactlogo
# IC=7.716 IC/col=0.857 n_of_columns=9 specificity:   
A |   8   8  24   0   8   0   0   0  96
C |  10   8  24   0   8  96  96  96   0
G |  17  19  24   0  19   0   0   0   0
T |  61  61  24  96  61   0   0   0   0
scan!

home
updated Sat Aug 2 04:29:30 2025