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legend  pdf

structure nameCRYSTAL STRUCTURE OF BENM_DBD/CATB SITE 1 DNA COMPLEX
(HTH-type transcriptional regulator BenM)
referenceNeidle et al.
sourceAcinetobacter sp.
experimentX-ray (resolution=3.10, R-factor=0.179)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyBacterial regulatory helixturnhelix protei;
multimeric complexes4ihs_CD 4iht_AB 4iht_CD
reference complex4iht_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureAQPPRR

Estimated binding specificities ?

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# IC=7.670 IC/col=0.852 n_of_columns=9 specificity:   
A |   7   9  24   9  96   7  96   0   0
C |   7   7  24  73   0   7   0  96   0
G |   7   7  24   7   0   7   0   0   0
T |  75  73  24   7   0  75   0   0  96
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updated Sun Jun 28 10:20:14 2026