structure name | TCAR-SSDNA COMPLEX CRYSTAL STRUCTURE REVEALS THE NOVEL SSDNA BINDING MECHANISM OF THE MARR FAMILY PROTEINS (TcaR transcription regulator) |
reference | Chen et al. 'Nucleic 42 5314 2014 |
source | Staphylococcus epidermidis |
experiment | X-ray (resolution=3.60, R-factor=0.274) |
structural superfamily | "Winged helix" DNA-binding domain; |
sequence family | MarR family; |
multimeric complexes | 4kdp_AB |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | SEKRRK |
Estimated binding specificities ?
contact |
A | 0 24 13 96 16 C | 96 24 54 0 13 G | 0 24 13 0 54 T | 0 24 16 0 13scan! |
Dendrogram of similar interfaces ?
matrix formatET--RGTCTGSTRG----KT L +-----------------------------6q2b_B +-1 --TT--PTTCSTNT----RT L +-2 +-----------------------------4lln_I ! ! NGLTKTPTSTTT----RTRT L +-3 +-----------------------------7el3_B ! ! --DCSA--TATT----RTRA L +-4 +-----------------------------1z9c_A ! ! LTNTHG--RTYTPT----RT L --5 +-----------------------------6qil_A ! --------------YGRG-- +-----------------------------4wcg_A |
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updated Tue Dec 19 09:03:20 2023