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structure nameTHE CRYSTAL STRUCTURE OF THE SECOND Z-DNA BINDING DOMAIN OF HUMAN DAI (ZBP1) IN COMPLEX WITH Z-DNA
(Z-DNA-binding protein 1)
referenceKim et al. Proc.Natl.Acad.Sci.USA 105 20671 2008
sourceHomo sapiens
experimentX-ray (resolution=1.45, R-factor=0.157)
structural superfamily"Winged helix" DNA-binding domain;
multimeric complexes3eyi_AB 4ka4_ADE
redundant complexes4ka4_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --------HT----RTITYT------------   L           +-----------------------------4kfc_B    
                                               +-3 
  --LTNTHG--RT--YTPT----------RT--   L         ! !           +-----------------6qil_A    
                                               ! +-----------2 
  ----STRGQTQA--ST----------HG--KT   L       +-4             !            +----7t8k_B    
                                             ! !             +------------1 
  ----------------RC----YG--KT----           ! !                          +----2acj_B    
                                           +-5 ! 
  --------ST--TAQC----ST----------         ! ! +-----------------------------8b4b_W    
                                         +-6 ! 
  ------KGTG--KANGYA--ST----------   L   ! ! +-----------------------------1zlk_A    
                                       --7 ! 
  LG------TA--KGTA----HTRG--------   L   ! +-----------------------------6jhe_A    
                                         ! 
  --------------NGSA--RGHGSC------   L   +-----------------------------6el8_A    
                                       

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updated Sat Jan 10 05:50:00 2026