2p7c_B : 3D-footprint complex

structure name	SOLUTION STRUCTURE OF THE BACILLUS LICHENIFORMIS BLAI MONOMERIC FORM IN COMPLEX WITH THE BLAP HALF-OPERATOR. (PENICILLINASE REPRESSOR)
source	BACILLUS LICHENIFORMIS
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
sequence family	Penicillinase repressor;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2p7c_B interface=26,42,43,45,46,49,50,54,66,68, mkkipqisdaelevmkviwkhssinTnevikelsktstwspKTiQTmlLRlikKgalnhhkegrvFvYtpnidesdyievks
interface signature	TKTQTLRKFY

Estimated binding specificities ?

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# IC=7.140 IC/col=1.020 n_of_columns=7

specificity:

A |  54   0   0  96   0  96  13
C |  13   0   0   0  96   0  13
G |  13   0   0   0   0   0  13
T |  16  96  96   0   0   0  57

scan!

Dendrogram of similar interfaces ?

matrix format

  
  LT--NTHG--RTYTPT--------------------RT   L                            +--------6qil_A    
                                                               +--------4 
  --------DCKT--RG----RGYA----KA--------   L                   !        +--------5jvt_A    
                                                       +-------5 
  ------------NGSA--RGHG--SC------------   L           !       !                 +6el8_A    
                                                       !       !              +--1 
  ------------NAST--RGHT--STFT----------   L           !       +--------------2  +1vtn_C    
                                                   +---6                      ! 
  --ST--------NAST--RTHT--STLT----------   L       !   !                      +--4lg0_A    
                                                   !   ! 
  --------------RC----YG--------KT------         +-7   !                    +----2acj_B    
                                                 ! !   +--------------------3 
  ----STRGQTQAST----------------HG----KT   L     ! !                        +----7t8k_B    
                                               +-8 ! 
  --------------------------------KGKG--   L   ! ! +-----------------------------5xfq_A    
                                             --9 ! 
  ----------STTAQC----ST----------------       ! +-----------------------------8b4b_W    
                                               ! 
  --------KGTGKANGYAST------------------   L   +-----------------------------1zlk_A

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updated Mon Jun 29 15:30:58 2026