2p7c_B : 3D-footprint complex

structure name	SOLUTION STRUCTURE OF THE BACILLUS LICHENIFORMIS BLAI MONOMERIC FORM IN COMPLEX WITH THE BLAP HALF-OPERATOR. (PENICILLINASE REPRESSOR)
source	BACILLUS LICHENIFORMIS
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
sequence family	Penicillinase repressor;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2p7c_B interface=26,42,43,45,46,49,50,54,66,68, mkkipqisdaelevmkviwkhssinTnevikelsktstwspKTiQTmlLRlikKgalnhhkegrvFvYtpnidesdyievks
interface signature	TKTQTLRKFY

Estimated binding specificities ?

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# IC=7.140 IC/col=1.020 n_of_columns=7

specificity:

A |  54   0   0  96   0  96  13
C |  13   0   0   0  96   0  13
G |  13   0   0   0   0   0  13
T |  16  96  96   0   0   0  57

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Dendrogram of similar interfaces ?

matrix format

  
  LT--NTHG--RTYTPT----------------RT   L                               +-----6qil_A    
                                                           +-----------3 
  --------------RC----YG--------KT--                       !           +-----2acj_B    
                                                       +---4 
  ------------NGSA--RGHG--SC--------   L               !   !                 +6el8_A    
                                                       !   !              +--1 
  ------------NAST--RGHT--STFT------   L       +-------5   +--------------2  +1vtn_C    
                                               !       !                  ! 
  --ST--------NAST--RTHT--STLT------   L       !       !                  +--4lg0_A    
                                             +-6       ! 
  --------DCKT--RG----RGYA----KA----   L     ! !       +---------------------5jvt_A    
                                           +-7 ! 
  ----STRGQTQAST----------------HGKT   L   ! ! +-----------------------------7t8k_B    
                                         --8 ! 
  ----------STTAQC----ST------------       ! +-----------------------------8b4b_W    
                                           ! 
  --------KGTGKANGYAST--------------   L   +-----------------------------1zlk_A

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updated Sat Jan 10 05:29:41 2026