interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF SEMET NOLR FROM SINORHIZOBIUM FREDII IN COMPLEX WITH OLIGO AT DNA
(NOLR)
referenceKrishnan et al. Proc.Natl.Acad.Sci.USA 111 6509 2014
sourceSINORHIZOBIUM FREDII
experimentX-ray (resolution=3.06, R-factor=0.134)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyBacterial regulatory protein, arsR family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSQK

Estimated binding specificities ?

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# IC=2.674 IC/col=0.669 n_of_columns=4 specificity:   
A |   9   0  67  11
C |   9   0  11   9
G |   9   0   9  67
T |  69  96   9   9
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updated Tue Dec 17 00:06:01 2024