interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF SEMET NOLR FROM SINORHIZOBIUM FREDII IN COMPLEX WITH OLIGO AT DNA
(NOLR)
referenceKrishnan et al. Proc.Natl.Acad.Sci.USA 111 6509 2014
sourceSINORHIZOBIUM FREDII
experimentX-ray (resolution=3.06, R-factor=0.134)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyBacterial regulatory protein, arsR family;
multimeric complexes4omy_AB 4omy_CD 4on0_AB 4on0_CD
reference complex4on0_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSQK

Estimated binding specificities ?

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# IC=2.635 IC/col=0.659 n_of_columns=4 specificity:   
A |  11   0  67   9
C |   9   0   9   9
G |   9   0  11  67
T |  67  96   9  11
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updated Thu Sep 12 19:55:44 2024