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legend  pdf

structure nameCRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORE1
(Arabinose metabolism transcriptional repressor)
referenceNarayanan et al. J.Biol.Chem. 291 1235 2016
sourceBacillus subtilis (strain 168) / Bacillus subtilis (strain 168)
experimentX-ray (resolution=2.07, R-factor=0.200)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyBacterial regulatory proteins, gntR family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureESRHRQ

Estimated binding specificities ?

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# IC=5.506 IC/col=0.787 n_of_columns=7 specificity:   
A |   4  67   0   9  52   0   0
C |  14   4   0  28  19  96   0
G |  16  25  96  14  24   0  96
T |  62   0   0  45   1   0   0
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updated Tue Dec 17 01:26:23 2024