interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORX1
(Arabinose metabolism transcriptional repressor)
referenceNarayanan et al. J.Biol.Chem. 291 1235 2016
sourceBacillus subtilis (strain 168) / Bacillus subtilis (strain 168)
experimentX-ray (resolution=1.97, R-factor=0.197)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyBacterial regulatory proteins, gntR family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureESHRQ

Estimated binding specificities ?

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# IC=6.156 IC/col=0.879 n_of_columns=7 specificity:   
A |   0   0   7  75   7   0   9
C |  96   0  14   7   9   0   7
G |   0  96   9   7   7  96   7
T |   0   0  66   7  73   0  73
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updated Tue Dec 17 01:26:29 2024